Quantitative Genetics and Genomics Workshop @ESALQ
May 20-24, 2019
Instructors
- Gota Morota - Virginia Polytechnic Institute and State University
- Garrett See - University of Nebraska-Lincoln
- Matthew Spangler - University of Nebraska-Lincoln
Dates and Location
- May 20-24, 2019
- Pavilhao de Zootecnia Nao Ruminantes
- University of Sao Paulo / ESALQ, Piracicaba, Sao Paulo, Brazil
Schedule
- May 20 (Mon.)
- 9:00-10:30 - Genomic Selection in Practice: Examples from the U.S. beef and swine industries
- 10:30-12:00 - Decoding best linear unbiased prediction (BLUP) [HTML][R]
- 12:00-13:30 - Lunch break
- 13:30-16:00 - GBLUP
- May 21 (Tue.)
- 9:00-10:30 - Introduction to single-step methods and evaluations
- 10:30-12:00 - Genotyping strategies and reducing the complexity of ssGBLUP
- 12:00-13:30 - Lunch break
- 13:30-16:00 - Lab: ssGBLUP
- May 22 (Wed.)
- 9:00-11:00 - Genetic analysis of time series high-throughput phenomics & Lab: ShinyAIM [HTML1][HTML2]
- 11:00-12:00 - Economic selection indices post genomic selection
- May 23 (Thu.)
- 9:00-10:30 - Inbreeding and heterosis
- 10:30-12:00 - Bayesian Alphabet
- 12:00-13:30 - Lunch break
- 13:30-16:00 - Lab: Bayesian Alphabet
- May 24 (Fri.)
- 9:00-11:00 - Bayesian factor analysis, Bayesian network, & Structural equation model for GWAS [HTML1][HTML2][R]
- 11:00-12:00 -Statistical learning for multi-omic data [HTML3]
- 12:00-13:30 - Lunch break
- 13:30-16:00 - Student presentations
Misc
