1/10/2017

R

RStudio

HCC clusters

  • Holland Computing Center
  • The course group name on HCC clusters is "asci431". New users who wish to use this group must apply for a new account at http://hcc.unl.edu/newusers. Existing users who wish to be added this group should email HCC support at hcc-support@unl.edu.

Red Angus datasets

Available at /work/asci431/SHARED/ on Crane

  • 1,639 animals with 74,669 SNPs (full)
  • 1,000 animals with 5,000 SNPS (subset)
  • 54,819 pedigree
  • chromosomes 1 - 29

Phenotypes

  • body weight
  • calving ease

Covariates

  • sex
  • age of dam
  • birth date
  • contemporary group